ProSpilcer
ProSplice Home An Alternative Splicing Database based on Protein, mRNA, and EST Sequences
About ProSplicer Search Statistic Database Comparison
 
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ProSplicer, is a putative alternative splicing database which stores alternative splicing information. These information are produced from variant proteins and expression patterns of a gene. Protein sequences, messenger RNA and expressed sequence tags (ESTs) provide valuable information about splice variants of genes.

Citing ProSplicer
H.D. Huang, J.T. Horng, C.C. Lee, and B.J. Liu. (2003) ProSplicer: a database of putative alternative splicing information derived from protein, mRNA and expressed sequence tag data,Genome Biology, Vol. 4, No. 4: R29. [PubMed]

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    Query Fields                

   (Gene Name, e.g., BRC)
   (Ensembl Gene ID, e.g., ENSG00000141837)
   (SwissProt Protein NAME, e.g., CCAG_HUMAN)
   (UniGene ID, e.g., Hs.122359)

    Query Fields    

   

       

   Demo 1    [Search Result]
   Demo 2    [SpliceView, Gene CACNB1A]
   Demo 3    [SpliceView, Gene CACNB1G]
   Demo 4    [Text Information, Gene BRCA1]
   Demo 5    [Show SIM4 / tBLASTn alignment result, Ensembl ID: ENSG00000008128,Protein ID: Q63699]
   Demo 6    [Show SIM4 / tBLASTn alignment result, Ensembl ID: ENSG00000139618,Nucleotide(mRNA) ID: NM_000059.1]





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Department of Computer Science and Information Engineering , National Central University
No.300, Jung-Da Rd., Chung-li , Tao-yuan, Taiwan 320 , R.O.C.

Contact with damay@db.csie.ncu.edu.tw